BLOG-N-PLAY.COM
Peru wants jail for nude using flag as saddle
Better use of patriotism than most politician s understa nd.

TOP THREE LINKS YOU MUST CLICK ON


Open Source Database Special Feature: An Introduction to Berkeley DB XML
Basic concepts, the shell commands, and beyond

Digg This!

Page 1 of 3   next page »

In this article I am going to introduce you to the latest version of the Berkeley DB XML, version 2.2.8. Berkeley DB XML (BDB XML) is built on top of the well-known Berkeley Database (BDB). BDB XML is an open source, native XML database. Like its ancestor, BDB, it's an embedded database. It provides APIs for the Java, C++, Perl, Python, PHP, and Tcl languages. It supports the popular XML query languages XQuery and XPath 2.0. I will show you how to use BDB XML in two ways. This month I will introduce the BDB XML shell, and next month we will explore using BDB XML with Java. BDB XML has a lot of features, and I will try to cover the most important ones.

What's an Embedded Database?
Some of you may be familiar with embedded databases. An embedded database runs within another program. It is not a stand-alone server such as Oracle, DB2, or eXist. It is the programmer's responsibility to invoke the proper API for the database. For example, although Berkeley DB XML has transaction support, in order to activate it, API calls have to be made by the programmer. Many popular relational and native XML databases run in client-server mode. Oracle, DB2, and eXist run as client-server applications, while database server runs as a stand-alone application and many clients can connect to it. Clients and server programs run in different address spaces, probably even on different machines. A connection can be established between them using the JDBC, or ODBC protocols. In an embedded database such as BDB XML, this is not the case; clients and server both run in the same address space, and they are actually the same program. The client manages the Berkeley DB XML through API calls. Next month I will give some Java examples, which will clarify what an embedded database is.

Installation
Installing BDB XML on the Windows operating system is very easy. BDB XML comes with an installer for Windows. If you are using a UNIX-like operating system you have to build BDB XML from the source code. See "Building Berkeley DB XML for UNIX/POSIX systems" for detailed build instructions. I installed BDB XML on my laptop, a 1.4GHz Pentium M processor running on Windows XP Professional with 512Mb main memory, without any problems. The installer will automatically set the necessary Path and Classpath environment variables.

Using dbxml Shell
The shell is located under the bin directory of the BDB XML installation directory. It should be in your Path, so you can run it from any location at the Windows command line.

Invoke the shell by typing "dbxml," and type "quit" to terminate the shell at any time. In order to list all available commands, type "help." To obtain detailed information about a command, type help and the command name. For example "help createContainer" will display usage information of the createContainer command.

createContainer
First of all we have to create a container in which to store our data. A container in BDB XML is similar to a folder. Many XML files can reside in a container. In this article I am going to use XBench sample XML files and queries. You can download the XML sample files and the XML Schema from www.cs.umb.edu/~smimarog/xmlsample/.

Let's create a container called xbench.dbxml. You can, of course, name it anything you want.

dbxml> createContainer xbench.dbxml
Creating node storage container with nodes indexed

The user can choose between two storage types: Wholedoc or Node. The default is Node type storage. If you choose Wholedoc storage, the XML files will be stored as they are with all of the white space preserved. Node storage performs better. The BDB XML documentation suggests not using Wholedoc storage for documents bigger than 1MB.

putDocument
Now we are ready to put some XML data into xbench.dbxml container. In BDB XML the opened container is the default container. We have to open xbench.dbxml before working with it.

dbxml> openContainer xbench.dbxml

Actually, dbxml shell commands on Windows are case insensitive, so it's possible to write opencontainer instead of openContainer, but I am going to follow the established naming conventions here.

dbxml> putDocument sample_10 C:\dictionary10.xml f
Document added, name = sample_10

The putDocument command takes three arguments: the first argument is the unique identifier of the document, the second argument is file name, and the third is either f or s. I chose the name sample_10 as the unique identification of this XML document. C:\dictionary10.xml is the file name, including the path. Finally, the last argument f states that it's a file. Instead of providing a filename it's possible to provide XML data itself within quotes. There are several examples in the "Introduction to Berkeley DB XML" document, which uses an XML string instead of a file name.

Query
As mentioned earlier, BDB XML supports XQuery and XPath 2.0 languages. There will be several examples for each language (see Listings 1-4). BDB XML found 28 results for this query. Note that in order to retrieve the results we have to use "print" command.

setVerbose
BDB XML will produce more explanation about what it does when the setVerbose feature is turned on. This command takes two numeric arguments: level and category. Using this command, let's get more information regarding the XQuery Example2 (see Listing 5).

No indices are used in this query. The execution time is around 48.5 seconds. Execution time is very high for this query for two reasons: this is not a trivial query, and there are no indices created yet. I will conceptually explain the possible execution plan for this query:

For each $entry as /dictionary/e
  For each descendant $desc of $entry
   For each value $val of $desc
   Check if 'hockey' is a substring
    of $val
   return $entry/hwg hw

There are three for loops in this algorithm. At the heart of the three loops there is a very costly substring (contains) operation. Considering that no indices have been created, execution time is pretty good. Creating indices improves the query performance dramatically (see Listings 6-7). (You can find more information about indices in the Indexing section of this article.)


Page 1 of 3   next page »

About Selim Mimaroglu
Selim Mimaroglu is a PhD candidate in computer science at the University of Massachusetts in Boston. He holds an MS in computer science from that school and has a BS in electrical engineering.

SUBSCRIBE TO OUR RSS FEEDS & GET YOUR SYS-CON NEWS LIVE!
Click to Add our RSS Feeds to the Service of Your Choice:
Google Reader or Homepage Add to My Yahoo! Subscribe with Bloglines Subscribe in NewsGator Online
myFeedster Add to My AOL Subscribe in Rojo Add 'Hugg' to Newsburst from CNET News.com Kinja Digest View Additional SYS-CON Feeds
Publish Your Article! Please send it to editorial(at)sys-con.com!

Advertise on this site! Contact advertising(at)sys-con.com! 201 802-3021

ADS BY GOOGLE
LATEST ARTICLES, NEWS & POSTS
Rating JRuby, Jython, and Groovy on the Java Platform
Open source software, while not synonymous with Java, may often be seamlessly integrated with Java code to produce a versatile synthesis that makes developers' lives much easier. In recent years, developers have taken some open source dynamic languages, commonly referred to as 's
5th International Virtualization Conference & Expo in London Will Be the Most Significant Virtualization Event to Date
The conference theme of the Virtualization Conference & Expo Europe, to be held in London, England, January 26-27, 2009, is 'Deploying Virtualization in the Enterprise.' The Call for Papers, which is now open, welcomes submissions from exceptional speakers with high-quality use c
Virtualization on Wall Street Conference & Expo Will Be a Leading Technology Event in New York
SYS-CON Events announced today that the Virtualization on Wall Street Conference & Expo will take place on March 22-24, 2009, in New York City. The event is expected to attract over 1,000 developers, architects, IT managers, and software professionals of every stripe who will be
SYS-CON's Virtualization Expo Was Larger Than Any Gartner Event in Two Years
Virtualization has quickly become a staple new concept for enterprise IT. At SYS-CON's 3rd International Virtualization Conference & Expo, held at the Roosevelt Hotel in New York City, June 23-24, we had exceptional speakers with high-quality use cases not only of how virtualizat
SYS-CON Launches Another Worldwide First: "Cloud Computing Journal"
The world's first journal devoted to the delivery of massively scalable IT resources as a service has been launched by SYS-CON Media, the latest in a series of leading-edge additions to its 25-plus stable of online and print publications such as Web 2.0 Journal, AJAX & RIA Journa
Cloud Computing - Start-Up Creates PowerPC-Based Cloud Desktop
There hasn't been a PowerPC-based computer since Apple abandoned the dingus and bolted to Intel, a move that did wonders for Apple's volumes. Now a Mountain View start-up called CherryPal is about to introduce a $249 Debian-based desktop that's about the size of a dime store pape
SUBSCRIBE TO THE WORLD'S MOST POWERFUL NEWSLETTERS

LIVE NEWS FROM THE WIRES
India's Biocon Secures Spot in List of Top Global Biotech Majors, an Industrial Info News Alert
A recent report released by Med Ad News ranked Biocon Limited (Bangalore, Karnataka), India's
Intrepid Mines Limited: Details of Conference Call-Second Quarter 2008 Results
Intrepid Mines Limited (TSX: IAU)(TSX: IXN)(ASX: IAU), an international gold and silver prod
Intrepid Mines Limited Activities Report: Three Months to 30 June 2008
Intrepid Mines Limited (TSX: IAU)(TSX: IXN)(ASX: IAU) -
Book Hotel Rooms Direct and Save?
Book direct and save, best available internet rate, best price guarantee, best rate publicly
Book Hotel Rooms Direct and Save?
Book direct and save, best available internet rate, best price guarantee, best rate publicly